PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001077G0020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family ERF
Protein Properties Length: 186aa    MW: 19610.9 Da    PI: 4.9501
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001077G0020genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.9e-182171155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++ykGVr +k +g+Wv+eIr p++   r r++lg+++t+e+Aa a +aa  +l+g
  PH01001077G0020 21 KKYKGVRLRK-WGKWVSEIRLPNS---RERVWLGSYDTPEKAALAFDAAFICLRG 71
                     59******99.**********933...5***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.02E-272183No hitNo description
SMARTSM003803.5E-312287IPR001471AP2/ERF domain
PfamPF008477.0E-112271IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-182282IPR016177DNA-binding domain
PROSITE profilePS5103220.8242281IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-262282IPR001471AP2/ERF domain
PRINTSPR003676.9E-92334IPR001471AP2/ERF domain
PRINTSPR003676.9E-94561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0002213Biological Processdefense response to insect
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009611Biological Processresponse to wounding
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MSSSPQPSTA SEDAEETPTQ KKYKGVRLRK WGKWVSEIRL PNSRERVWLG SYDTPEKAAL  60
AFDAAFICLR GPGAEGSINF PNSPPSVRCR SCDPQVVQAA ALSHANRVTA HEGAVDSAVL  120
MDVDSSTNAT AAWASQGLVV PDVDVGNEVV APVQADGSID WSPMMANPPP LFSPIGLGAT  180
RTGSY*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00601PBMTransfer from AT1G74930Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008680656.11e-57PREDICTED: dehydration-responsive element-binding protein 1G-like
SwissprotQ9S7L51e-35ERF18_ARATH; Ethylene-responsive transcription factor ERF018
TrEMBLA0A0E0K5Z11e-59A0A0E0K5Z1_ORYPU; Uncharacterized protein
STRINGGRMZM2G097081_P014e-57(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.19e-37ERF family protein